Serf 2.77

Serf 2.77 Screenshot Serf is a software application to analyse electrophysiological data for MS-Windows 95, 98, 2 and XP.

Developer:   Jan de Weille
      software by Jan de Weille →
Price:  0.00
License:   Freeware
File size:   0K
Language:   
OS:   Windows Vista (?)
Rating:   0 /5 (0 votes)

Serf is a software application to analyse electrophysiological data for MS-Windows 95, 98, 2 and XP.

Serf accepts ASCII data, ISO-2 data and files in AxonInstruments formats for the PC (PClamp, Fetch etc) and the MacIntosh (Axograph type 1 and 2).

It has an interface for use with Media Cybernetics IP+ scripts.
It outputs a vector drawing ready for publication.

Serf features
  • Simple, intuitive "visual" program layout.
  • Fast: No need to switch between multiple programs to obtain your figure at last, no useless options, few dialogue windows, lots of short-cuts and hence a minimum of mouseclicking to do, resulting in a gain of time.
  • The program is build around four types of window each having its own menu:
    1) Windows showing the raw input records (input windows).
    2) Windows showing wav records (sound windows).
    3) Windows showing vector drawings (drawing sheets).
    4) Windows showing columns of numerical data (spreadsheets).
  • Items in the last two types of window may communicate such that a modification in a column in a spreadsheet results in a change in the associated vector graph, allowing easy editing.
  • The concatenated mode of plotting of input data allows a quick overview of an experiment.
  • The path from input to graph may involve a single step or multiple steps using a spreadsheet to hold and manipulate temporary data.
  • Curve fitting using either build-in or user-defined functions can be carried out in each of the three types of window.
  • The math library contains many useful functions such as convolution and deconvolution, Fourier transform, matrix inversion and eigen decomposition of a matrix.
  • Statistical tests for data in spreadsheet columns: linear correlation, chi-2, Student's t-test, Fisher's F-test, Tukey's q-test (one-way anova).
  • Bitmaps may be imported and manipulated on the drawing sheet.
  • Simulation of synaptic currents (minis) and Markov simulation of unitary currents, macroscopic currents and dwell time histograms.
  • Estimation of rate constants of a Markov chain from experimental data (macroscopic currents and dwell time histograms).
  • Create dwell time distributions from rate constants in a transition matrix.
  • Rapid detection of synaptic currents using a user-defined template, stacked minis are recognised with high temporal resolution.
  • Determine a system impulse response using your sound card.
  • Data other than AxoLab files (PClamp, Axograph) may be imported in (tab- or comma-delimited) ASCII format.
  • With the JRTalk extension Serf may be controlled by a program you have written in Visual Basic, Mediacy's IP+ script or C.

    tags windows showing  dwell time  time histograms  rate constants  and dwell  currents and  user defined  synaptic currents  macroscopic currents  

    Serf 2.77 screenshot


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